media:new25
PyMOL v2.5 Release Notes
Exclusive Incentive PyMOL Features
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MAE import: more ribbon styles and label improvements
MAE import dialog: discrete states support
Builder: Nucleotides from the PDB can now be extended
APBS plugin: PDB2PQR 3 compatibility
STL export: average normals when exporting
`sphere_mode` s 10/11 scaled
Builder: “Remove Residue” button added
Load collada as CGO
File Import/Export
DX binary map import support (*dxbin)
PDB/MMTF export: symmetry information now added
Improved FASTA import
Support for map.gz and mrc.gz extensions
Builder & Panels
Builder: Improved fuse command (disallows hypervalent bonds, substitute monovalent atoms instead of attaching to them)
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Panel: Properties inspector now supports unsetting settings with “Delete” key
Graphics & Visualization
`sphere_mode` 5 removed (9 as replacement)
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Isosurface generation via marching cubes with setting `isosurface_algorithm, (0, 1)` (0 requires VTKm)
PBC Handling
API CHANGES
Python 2 support removed
pbc argument added to rebond, smooth, and intra_fit
png(None) returns bytes
scene_order() allows list for `names`
pbc_wrap() and pbc_unwrap added
matrix_reset() supports `state=0` for all states
editing_ring() added
unset now restores the default value for global settings
load_traj now uses state=1 by default
get_area command and dots representation: Exclude “flag ignore” atoms
PyMOL v2.5.1 Maintenance Release (2021-07-01)
Fix align and related commands output regression
Fix crash when moving labels on MacOS
Fix quiet argument for png
PyMOL v2.5.2 Maintenance Release (2021-08-20)
media/new25.txt · Last modified: 2021/08/20 14:13 by johnson