Table of Contents
PyMOL v1.7.2.0 Notes
Graphics
Commands
Misc
Settings
Bug Fixes
PyMOL v1.7.2.1 Hotfix Notes
PyMOL v1.7.2.2 Hotfix Notes
PyMOL v1.7.2.3 Hotfix Notes
PyMOL v1.7.2.0 Notes
Release Date: August 4, 2014.
Graphics
pre-integrated
volume rendering
, reduces layering artefacts in volumes
real-time antialiasing
Commands
volume
now takes a ramp as its third argument
volume_color
can color volumes by custom ramps and ramp presets
volume_ramp_new
can register a new volume ramp preset
desaturate
desaturates colors
join_states
creates a multi-state object from multiple objects
alphatoall
transfers atom properties from the CA atoms to the full residue
loadall
loads all files from a file name pattern
centerofmass
calculates the center of mass
extra_fit
performs a many-to-one alignment
api
queries
API
details about a command
Misc
mmCIF loading improvements:
multi-model support
read secondary structure
iterate/alter/label “s.” setting autocompletion
better internal
GUI
menu performance by submenu callable support
run pml and py script with “load”
support ccp4 maps with mode 0 and 1
Simple text editor to edit pymolrc (Tk
GUI
: File > Edit pymolrc)
Settings
volume_mode
to toggle between post-classified and pre-integrated volume rendering
intensity adjustment when changing
volume_layers
antialias_shader
Bug Fixes
fix distorted labels with stereo walleye/crosseye
fix atom properties: assign empty string
fix cartoon picking doesn't honor masking atoms/objects
fix: cyclic nucleotide was marked as polymer
PyMOL v1.7.2.1 Hotfix Notes
reimplemented volume carving
revert opaque_background support for “draw” since it broke background color in real-time rendering (always black)
PyMOL v1.7.2.2 Hotfix Notes
Fixed mouse wheel operations on Windows for non-maximized viewer window
Fixed broken “putty” cartoons
PyMOL v1.7.2.3 Hotfix Notes
Fixed ray tracing “dots” representation
Fixed SMAA (antialias_shader=2) for Nvidia cards