PyMOL API-only Function Reference

List of possibly relevant API functions which are not exposed as a PyMOL command.

In bold are function which are frequently used by projects like PSICO.

Use help(function) to learn more about a function. Example:

PyMOL>help(cmd.find_pairs)
...

cmd.exp_path
cmd.extend
cmd.extendaa
cmd.find_pairs
cmd.get_atom_coords
cmd.get_cifstr
cmd.get_color_index
cmd.get_color_indices
cmd.get_color_tuple
cmd.get_coords
cmd.get_coordset
cmd.get_fastastr
cmd.get_frame
cmd.get_legal_name
cmd.get_model
cmd.get_names
cmd.get_names_of_type
cmd.get_object_list
cmd.get_object_matrix
cmd.get_object_state
cmd.get_object_ttt
cmd.get_pdbstr
cmd.get_phipsi
cmd.get_raw_alignment
cmd.get_scene_list
cmd.get_session
cmd.get_setting_boolean
cmd.get_setting_float
cmd.get_setting_int
cmd.get_setting_text
cmd.get_setting_tuple
cmd.get_state
cmd.get_str
cmd.get_unused_name
cmd.get_volume_field
cmd.get_volume_histogram
cmd.get_wizard
cmd.get_wizard_stack
cmd.load_brick
cmd.load_callback
cmd.load_cgo
cmd.load_coords
cmd.load_coordset
cmd.load_map
cmd.load_model
cmd.load_object
cmd.read_mmodstr
cmd.read_molstr
cmd.read_pdbstr
cmd.read_sdfstr
cmd.read_xplorstr
cmd.select_list
cmd.set_frame
cmd.set_object_color
cmd.set_object_ttt
cmd.set_session
cmd.set_state_order
cmd.set_wizard
cmd.set_wizard_stack
cmd.transform_object
cmd.transform_selection
cmd.translate_atom