“orient” aligns the principal components of the atoms in the selection with the XYZ axes.

orient [ selection [, state [, animate ]]]

selection = a selection-expression or name-pattern {default: (all)}

state = 0: use all coordinate states {default}

state = -1: uses only coordinates for the current state

state > 0: uses coordinates for a specific state

orient organic 

The function is similar to the orient command in X-PLOR.

zoom | origin | reset | cmd.orient | commands