PyMOL Incentive Product Tutorials

PLEASE DO NOT REDISTRIBUTE THESE FILES–they are exclusively for PyMOL users who choose to sponsor the project via subscription purchases.

On-Site Training

Schrödinger offers on-site training for each class/tutorial below. If participating in an on-site training session, please download and extract the archive onto the Desktop of the machine you’ll be using during the tutorial. If you’re interested in on-site training, please email sales@schrodinger.com.

Cheat Sheets

For Beginners

Download PyMOL Cheat Sheet

This is a two-page PDF cheat sheet that covers basic PyMOL usage. Print this and keep it next to your desk.

For Intermediate Users

Download Quick Reference Guide

  • Advanced User Interface Controls
  • Commands, Scripts, and Programs
  • Movies and Animation
  • ...and more

Tutorial: Introduction to PyMOL

Download Introduction to PyMOL

This ZIP archive contains the latest revision of the PyMOL Introductory Tutorial PDF file along with the data files used in the tutorial. Topics include:

  • The PyMOL GUI
  • Using the mouse
  • Creating and saving images
  • ...and more

Tutorial: Intermediate PyMOL

Download Intermediate PyMOL

This ZIP archive contains the latest revision of the Intermediate PyMOL Tutorial PDF file and accompanying data files used in the tutorial. Topics include:

  • Mastering the PyMOL command line interfaces
  • Mastering Selections
  • Understanding PyMOL commands
  • ...and more

Tutorial: Moviemaking in PyMOL

Download Moviemaking in PyMOL

This ZIP archive contains the latest revision of the Moviemaking Tutorial PDF file and accompanying data files used in the tutorial. Topics include:

  • Scene-based movies
  • Object motions
  • Trajectories
  • ...and more

Tutorial: Molecular Editing and Small Molecule Cleanup

Download Molecular Editing and Small Molecule Cleanup

This ZIP archive contains the latest revision of the Molecular Editing and Small Molecule Cleanup Tutorial PDF file and accompanying data files used in the tutorial. Topics include:

  • Molecular editing with the mouse and keyboard
  • Fragment based building using the Builder
  • Small molecule cleanup
  • ...and more
 
tutorials.txt
 
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