User Tools

Site Tools


Setting Options

  • -D defer_builds_mode-setting → set defer_builds_mode in order to defer generation of geometries until they are needed. This setting is can improve performance when loading long dynamics trajectories or thousands of small-molecule structures.
  • -o → disable security protections – CAREFUL! ONLY USE WHEN OPENING TRUSTED CONTENT.
  • -O sphere_mode-setting → show the molecule as spheres and set sphere_mode in order to potentially reduce the complexity of the sphere representation.
    pymol -O 1 huge_file.pdb

    can be used to load and display systems with millions of atoms.

  • -Z auto_zoom-setting → set the auto_zoom mode.

See Also

launch/setting.txt · Last modified: 2013/08/19 21:01 (external edit)